BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H11SP1|AL429306
(931 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1816 0.0
>3x_Contig1380
Length = 6718
Score = 1816 bits (915), Expect = 0.0
Identities = 927/931 (99%), Gaps = 1/931 (0%)
Strand = Plus / Minus
Query: 1 gatccaacactataacctccaccattttgccaccgtgattttcaagtatggtgtagtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5146 gatccaacactataacctccaccattttgccaccgtgattttcaagtatggtgtagtctt 5087
Query: 61 tatctagattgtagtggctgtggaaatcttgaagtttgttgctgtcacttgcacgtagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5086 tatctagattgtagtggctgtggaaatcttgaagtttgttgctgtcacttgcacgtagtt 5027
Query: 121 tgtcattagaataacatgatgggcgggtctctggagccttagaggactttgcctgccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5026 tgtcattagaataacatgatgggcgggtctctggagccttagaggactttgcctgccata 4967
Query: 181 tattcggcaacttatactgatcagattttttaccagttgtttccgttaacgcaggttcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4966 tattcggcaacttatactgatcagattttttaccagttgtttccgttaacgcaggttcag 4907
Query: 241 tgacagtagttgcaatactggaatacgatctatgtgatacctctgattcatacgatgact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4906 tgacagtagttgcaatactggaatacgatctatgtgatacctctgattcatacgatgact 4847
Query: 301 gactgtttgtttttgtattatttgaaagtctagtagctggatccaggagagatctgtttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4846 gactgtttgtttttgtattatttgaaagtctagtagctggatccaggagagatctgtttc 4787
Query: 361 tgctaatatcttttagtgcttctgccattatcctactagttggaatctccaaagatgtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4786 tgctaatatcttttagtgcttctgccattatcctactagttggaatctccaaagatgtct 4727
Query: 421 caatattagttgcaaatgagtggatggtggacaacggttttggtgggattggtgagctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4726 caatattagttgcaaatgagtggatggtggacaacggttttggtgggattggtgagctgg 4667
Query: 481 aatttacacggccctgttcggcatttttctctacgataatggcgatcggagtagctttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4666 aatttacacggccctgttcggcatttttctctacgataatggcgatcggagtagctttag 4607
Query: 541 agggtacttcgtcatcttgagattgttcatcgacagtaaccttgggtagtgcctcagcgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4606 agggtacttcgtcatcttgagattgttcatcgacagtaaccttgggtagtgcctcagcgc 4547
Query: 601 tattcatgaaactaaattgttggtcatcttcagaactgtatactgaagaaatgtcgtaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4546 tattcatgaaactaaattgttggtcatcttcagaactgtatactgaagaaatgtcgtaaa 4487
Query: 661 cttcttccacacttttatcacctggggtttcgtcaatactaagggttttatttctagaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4486 cttcttccacacttttatcacctggggtttcgtcaatactaagggttttatttctagaat 4427
Query: 721 ttatcgccacagtggctgtttcacttccagggtactcagtacgcaggctcaacatgctgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4426 ttatcgccacagtggctgtttcacttccagggtactcagtacgcaggctcaacatgctgc 4367
Query: 781 taggtcttagaggagatctttggggtattttaggagctggcggactgctttcttcctgag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4366 taggtcttagaggagatctttggggtattttaggagctggcggactgctttcttcctgag 4307
Query: 841 tgtgtatgtmattcacgggagaaattgtcacaaacatgtctgtcccattatgaatacttc 900
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4306 tgtgtatgtcattcacgggagacattgtcacaaacatgtctgtcccattatgaatacttc 4247
Query: 901 tcgaccttttatgggcatra-atcgagggcc 930
|||||||||||||||||| | ||||||||||
Sbjct: 4246 tcgaccttttatgggcatgagatcgagggcc 4216
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5632
Number of Sequences: 1807
Number of extensions: 5632
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)